Getting started
Installation
Background
PCNtoolkit Background
Function & Class Docs
Module Index
Tutorials
DEMO ON NORMATIVE MODELING
Predictive Clinical Neuroscience Toolkit
Hierarchical Bayesian Regression Normative Modelling and Transfer onto unseen site.
Using lifespan models to make predictions on new data
Predictive Clinical Neuroscience Toolkit
The Normative Modeling Framework for Computational Psychiatry Protocol
Data Preparation
Algorithm & Modeling
Evaluation & Interpretation
Visualization of normative modeling outputs
Post-hoc analysis on normative modeling outputs
Load Data
Create Train/Test Splits
Principal Component Regression (BBS)
Connectome Predictive Modelling
Lasso (Linear Regression + L1 Regularization)
Ridge (Linear Regression + L2 Regularization)
Elastic Net (Linear Regression + L1/L2 Regularization)
Other Useful Stuff
Frequently Asked Questions
Glossary
How to cite PCNtoolkit
Acknowledgements
Predictive Clinical Neuroscience Toolkit
Overview: module code
All modules for which code is available
bayesreg
fileio
gp
normative_parallel
rfa
trendsurf